Review



spearman correlation matrices and mds plots  (Addinsoft inc)

 
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    Addinsoft inc spearman correlation matrices and mds plots
    Multi-dimensional scaling plots of environmental variables and narB subgroup abundances from CN207 samples . Spearman similarity matrices were used to construct the <t>MDS</t> plots. All data used is from the DCM and above, and were log ( x + 1) transformed before any analysis. narB subgroup abundance variables are italicized while environmental variables are not. (A) 3D plot of environmental and abundance variables, with the third dimension being represented by color (Kruskal's stress = 0.08). (B) 2D MDS bubble plot of narB subgroup abundances (dots) and their respective correlation coefficients in relation to nitrate (bubbles; Kruskal's stress = 0.04). A Spearman similarity matrix that contained only subgroup abundance data [same as in 9 (A) ] was used to construct the plot. Bubbles are scaled so that their width equates to the Spearman correlation coefficient value between the abundance of the respective subgroup and nitrate. All correlation coefficient values were significant ( p < 0.05) except for subgroups A_C1 and F_C1 (small bubbles). Colored bubbles represent positive coefficients and grayscale bubbles are for negative values. The width of the largest bubble (C_C1) equates to 0.68, while the smallest bubbles equate to ∼0.18.
    Spearman Correlation Matrices And Mds Plots, supplied by Addinsoft inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spearman+correlation+matrices+and+mds+plots/pmc03153035-269-4-10?v=Addinsoft+inc
    Average 90 stars, based on 1 article reviews
    spearman correlation matrices and mds plots - by Bioz Stars, 2026-06
    90/100 stars

    Images

    1) Product Images from "Differential Distributions of Synechococcus Subgroups Across the California Current System"

    Article Title: Differential Distributions of Synechococcus Subgroups Across the California Current System

    Journal: Frontiers in Microbiology

    doi: 10.3389/fmicb.2011.00059

    Multi-dimensional scaling plots of environmental variables and narB subgroup abundances from CN207 samples . Spearman similarity matrices were used to construct the MDS plots. All data used is from the DCM and above, and were log ( x + 1) transformed before any analysis. narB subgroup abundance variables are italicized while environmental variables are not. (A) 3D plot of environmental and abundance variables, with the third dimension being represented by color (Kruskal's stress = 0.08). (B) 2D MDS bubble plot of narB subgroup abundances (dots) and their respective correlation coefficients in relation to nitrate (bubbles; Kruskal's stress = 0.04). A Spearman similarity matrix that contained only subgroup abundance data [same as in 9 (A) ] was used to construct the plot. Bubbles are scaled so that their width equates to the Spearman correlation coefficient value between the abundance of the respective subgroup and nitrate. All correlation coefficient values were significant ( p < 0.05) except for subgroups A_C1 and F_C1 (small bubbles). Colored bubbles represent positive coefficients and grayscale bubbles are for negative values. The width of the largest bubble (C_C1) equates to 0.68, while the smallest bubbles equate to ∼0.18.
    Figure Legend Snippet: Multi-dimensional scaling plots of environmental variables and narB subgroup abundances from CN207 samples . Spearman similarity matrices were used to construct the MDS plots. All data used is from the DCM and above, and were log ( x + 1) transformed before any analysis. narB subgroup abundance variables are italicized while environmental variables are not. (A) 3D plot of environmental and abundance variables, with the third dimension being represented by color (Kruskal's stress = 0.08). (B) 2D MDS bubble plot of narB subgroup abundances (dots) and their respective correlation coefficients in relation to nitrate (bubbles; Kruskal's stress = 0.04). A Spearman similarity matrix that contained only subgroup abundance data [same as in 9 (A) ] was used to construct the plot. Bubbles are scaled so that their width equates to the Spearman correlation coefficient value between the abundance of the respective subgroup and nitrate. All correlation coefficient values were significant ( p < 0.05) except for subgroups A_C1 and F_C1 (small bubbles). Colored bubbles represent positive coefficients and grayscale bubbles are for negative values. The width of the largest bubble (C_C1) equates to 0.68, while the smallest bubbles equate to ∼0.18.

    Techniques Used: Construct, Transformation Assay



    Similar Products

    spearman correlation matrices and mds plots  (Addinsoft inc)
    90
    Addinsoft inc spearman correlation matrices and mds plots
    Multi-dimensional scaling plots of environmental variables and narB subgroup abundances from CN207 samples . Spearman similarity matrices were used to construct the <t>MDS</t> plots. All data used is from the DCM and above, and were log ( x + 1) transformed before any analysis. narB subgroup abundance variables are italicized while environmental variables are not. (A) 3D plot of environmental and abundance variables, with the third dimension being represented by color (Kruskal's stress = 0.08). (B) 2D MDS bubble plot of narB subgroup abundances (dots) and their respective correlation coefficients in relation to nitrate (bubbles; Kruskal's stress = 0.04). A Spearman similarity matrix that contained only subgroup abundance data [same as in 9 (A) ] was used to construct the plot. Bubbles are scaled so that their width equates to the Spearman correlation coefficient value between the abundance of the respective subgroup and nitrate. All correlation coefficient values were significant ( p < 0.05) except for subgroups A_C1 and F_C1 (small bubbles). Colored bubbles represent positive coefficients and grayscale bubbles are for negative values. The width of the largest bubble (C_C1) equates to 0.68, while the smallest bubbles equate to ∼0.18.
    Spearman Correlation Matrices And Mds Plots, supplied by Addinsoft inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spearman+correlation+matrices+and+mds+plots/pmc03153035-269-4-10?v=Addinsoft+inc
    Average 90 stars, based on 1 article reviews
    spearman correlation matrices and mds plots - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Multi-dimensional scaling plots of environmental variables and narB subgroup abundances from CN207 samples . Spearman similarity matrices were used to construct the MDS plots. All data used is from the DCM and above, and were log ( x + 1) transformed before any analysis. narB subgroup abundance variables are italicized while environmental variables are not. (A) 3D plot of environmental and abundance variables, with the third dimension being represented by color (Kruskal's stress = 0.08). (B) 2D MDS bubble plot of narB subgroup abundances (dots) and their respective correlation coefficients in relation to nitrate (bubbles; Kruskal's stress = 0.04). A Spearman similarity matrix that contained only subgroup abundance data [same as in 9 (A) ] was used to construct the plot. Bubbles are scaled so that their width equates to the Spearman correlation coefficient value between the abundance of the respective subgroup and nitrate. All correlation coefficient values were significant ( p < 0.05) except for subgroups A_C1 and F_C1 (small bubbles). Colored bubbles represent positive coefficients and grayscale bubbles are for negative values. The width of the largest bubble (C_C1) equates to 0.68, while the smallest bubbles equate to ∼0.18.

    Journal: Frontiers in Microbiology

    Article Title: Differential Distributions of Synechococcus Subgroups Across the California Current System

    doi: 10.3389/fmicb.2011.00059

    Figure Lengend Snippet: Multi-dimensional scaling plots of environmental variables and narB subgroup abundances from CN207 samples . Spearman similarity matrices were used to construct the MDS plots. All data used is from the DCM and above, and were log ( x + 1) transformed before any analysis. narB subgroup abundance variables are italicized while environmental variables are not. (A) 3D plot of environmental and abundance variables, with the third dimension being represented by color (Kruskal's stress = 0.08). (B) 2D MDS bubble plot of narB subgroup abundances (dots) and their respective correlation coefficients in relation to nitrate (bubbles; Kruskal's stress = 0.04). A Spearman similarity matrix that contained only subgroup abundance data [same as in 9 (A) ] was used to construct the plot. Bubbles are scaled so that their width equates to the Spearman correlation coefficient value between the abundance of the respective subgroup and nitrate. All correlation coefficient values were significant ( p < 0.05) except for subgroups A_C1 and F_C1 (small bubbles). Colored bubbles represent positive coefficients and grayscale bubbles are for negative values. The width of the largest bubble (C_C1) equates to 0.68, while the smallest bubbles equate to ∼0.18.

    Article Snippet: Spearman correlation matrices and MDS plots were generated in XLSTAT (Addinsoft; New York, NY, USA).

    Techniques: Construct, Transformation Assay